Where to upload and store annotated genetic variant data online?
Hi. I'm willing to upload my annotated genomic variant (somatic mutation) data of four bladder cancer patients sequenced by whole-exome sequencing. I have annotated them using Annovar. I have the data as excel files and also have the corresponding VCF files. Which database should be most appropriate to upload these files to? I know about NCBI GenBank but it only stores sequence files as FASTA format. Should I look for any other database?
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why do you want to "upload" those data ? publication ? visualization ? sharing ?
For sharing the data and getting the data reviewed. And yes later publication.
You can use Zenodo: https://zenodo.org/
Review the FAQ at first: https://help.zenodo.org/