download dataset of annotated gene and the domains it contains

I'm looking to download a dataset that contains all annotated genes and the domains it contains. is there a preferred location for this?

domains database

• 548 views • link

written 3.3 years ago by pick •

0 answers

No answers yet.

More posts like this

multiple response SRR URLs for the same service 's3'
written 2.1 years ago by akar_ozan01 •

So I wanted to download a GEO dataset that contains 36 runs and I just put the main SRA accession number in order to download …
Best site for finding domain by genome location
written 3.3 years ago by pick •

I’m looking for a site that has API that allows to search for a gene, and get all domains in that gene based on their …
Fast mapping from PDB id to CATH domains
written 3.4 years ago by jsylee0528 •

I have around 30k PDB ids that I want to map to their corresponding CATH domains. Is there an existing database that I can download …
Should "dispersion" in edgeR be calculated for entire dataset or just conditions being analyzed?
written 5.4 years ago by O.rka

I'm creating a wrapper around edgeR's exactTest. I noticed (and understand why) the results different for when I calculate dispersion using the entire dataset and …
cancer dataset contains sequencing genes and its mutation
written 7.1 years ago by soheirnoori80 •

I am looking for a dataset of cancer that contains genes mutation information can any help me to find this dataset
Looking for small RNA-seq in single cell
written 9.0 years ago by jack

Hey, I'm looking database that contains small RNA-seq for single cell. Is there any resource to download single cell small RNA-seq ?
profile data from GEOprofiles
written 9.3 years ago by Mee •

Hi, I am trying to infer gene interactions from gene expression data. I am looking for expression data at https://www.ncbi.nlm.nih.gov/sites/GDSbrowser#details. I can get the data …
bwa XA field: What is the procedure for the binning of all but one alternative alignments into XA?
written 9.7 years ago by izaak.coleman1 •

Hello All, When running `bwa aln` the output sam file contains a series of bwa specific fields, one of which, XA, describes alternative alignment locations …
extracting domain regions from PDB
written 10.2 years ago by a.abnousi •

I'm working on an algorithm that will determine the conserved regions like sequence level domains for the input protein sequences. I am evaluating my method …
Q: Extracting dibasic PC Cleavage sites
written 11.6 years ago by ddofer •

I want to get a dataset of all known, validated cleavage sites, of prepro-hormone/protein precursors (e.g. insulin, neuropeptide precursors..), cleaved by PCs (e.g. Furin..). I'm …