Hello,

while reading GATK's article here: https://gatk.broadinstitute.org/hc/en-us/articles/360035531112--How-to-Filter-variants-either-with-VQSR-or-by-hard-filtering

... they helpfully supply some default tranch values and suches for WGS data. They say that for WES and further detail we go to this article: https://gatk.broadinstitute.org/hc/en-us/articles/360035531612?id=1259

... and there is no mention of WES-specific settings. Amazing.

Am I missing something here? Are we supposed to guess some good values? I can't be the first to wonder this... but Google fails me. :(

Thanks in advance, Joel