I used meme-chip command to find my motif in the ChIPseq data. However, my results had 25 bp. The paper shows that the motif had …

Hi to all! I'm struggling to learn MEME, and I have a question on it. I have 6 promoter sequences of one protein from Arabidopsis. …

I have the data from an RNA-seq experiment, and as a result I have a list of genes with their corresponding number of genes. I …

Hi everyone, i have been doing analysis on promoters and i know meme is a great tool to use, however, i need to study thousands …

Hi everyone, so i have a question about mast of meme suite, i have tried running mast on a pair of orthologous gene promoter using …

I have a bed file of enhancer sites that I'd like to run motif analysis on. I'm looking for core promoter elements (if any exist) …

I want to find a PWM-motif that is present in promoter regions of Toxoplasma gondii. I basically want to see the presence of specific DNA …

I've been gathering some evidence that several genes are directly regulated by a particular transcription factor I find interesting. I've obtained the transcription factor's binding …

Hello all, My question is pretty much the title; I have DNA motifs from the human genome from the output of MEME and I want …

<p>I have a Chip-seq data and have identified a motif de-novo in MEME (<a href='http://meme.nbcr.net/meme/doc/meme-chip.html'>http://meme.nbcr.net/meme/doc/meme-chip.html</a>), I also have a list of genes from Chipseq data …