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How to install VEP plugins in conda environment

I installed VEP through miniconda and use VEP through my conda environment. I would like to install VEP plugins (ex, CADD), but I do not have the INSTALL.pl script VEP instructs to use to install plugins (I think this is because I did not use git to install VEP, but rather miniconda). How can plugins be installed for VEP through a conda environment?

conda vep plugin
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updated by rpolicastro rpolicastro • written by vep_n00b • vep_n00b

1 answer

conda aliases it as vep_install, so for example vep_install -g CADD should work.

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written by rpolicastro rpolicastro

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