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How to calculate Summary.csv statistics after re-running STARSolo cell filtering?

I re-ran the STARSolo cell filtering on my raw matrix and would like to get the same Summary.csv file which is generated after initially running STARSolo. Does anyone know how I can re-create this file with my new filtered results? I'm specifically interested in the "unique reads in cell mapped to gene" and the "fraction of unique reads in cells" metrics. Thanks for your time/help.

scrna-seq starsolo star

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