Thank you, I also found vcf files https://ftp.ensembl.org/pub/release-109/variation/vcf/felis_catus/
known-sites for Felis_catus_9.0 (GCA_000181335.4)
Good afternoon dear members,
I am processing Cat WGS samples and running gatk BaseRecalibrator and one of the required parameters is --known-sites - One or more databases of known polymorphic sites used to exclude regions around known polymorphisms from analysis.
Does anyone know where I can find a VCF file similar to those in GATK resources bundle available for humans?
Thank you
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Pierre Lindenbaum
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