Amazing, thank you!
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liftover output column help
Hello,
When I input this (just a section of the whole file) hg19 location to hg38
chr1 45794129 45796519
liftover outputs this
chr1 45328457 45330847 chr1:45794130-45796519 1
What is the 4th column and why is it outputted?
Thanks! Amy
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1 answer
chr1 45328457 45330847 chr1:45794130-45796519 1
What is the 4th column and why is it outputted?
the fourth column is a reminder of your original input (chr1 45794129 45796519 = 0-Based BED interval) as a 1-Based interval (CHR):(START+1):(END)
see also: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
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