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How can I identify housekeeping genes from scRNA-seq data?

Hello everyone,

I have scRNA-seq data and I would like to verify the expression of some known housekeeping genes in my clusters. I did some ViolinPlots but I would like to obtain a real statistic related to their expression in different clusters. Is there a method as FindVariableFeatures() but for Non Variable ones?

Thank you!

singlecell r seurat scrnaseq

1 answer

Granted I don't have a lot of experience with scRNAseq, I would run a differential gene expression analysis between clusters and look at your genes of interest.

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