Finding Coordinates Of Genes In Genome

Hi Guys

I think I have a very trivial question. I have a multi-fasta file of rRNA genes. I need to find their location in the genome. It will be easy to blast them but not sure how can I extract the start and end positions of the best match on the genome for each quey.

Thanks! -Abhi

blast

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written 15.1 years ago by Abhi

1 answer

Hey Guys

I think I got the answer. I used megablast and changed the output to report the tab -delimated one line format.

-Abhi

• 1 views • link

written 15.1 years ago by Abhi

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