This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How to identify if a differentially expressed protein is ligand or receptor?

Hi All,

I have a list of differentially expressed proteins and would like to know which one of these are either ligands or receptors. How can I identify this?

Appreciate all your help!

Thanks

proteomics
• 1,553 views • link
updated by Matthias Zepper Matthias Zepper • written by JSPO • JSPO

Hi @Matthias Zepper,

Thanks so much for the quick response! Are there any R packages you can share which can help me answer the question?

• 0 views • link
written by JSPO • JSPO

If you are familiar with R or at least prefer a solution in R then please state it specifically in the question the next time ;-) The Portal which I recommended can do similar things in a GUI without writing any code and is thus typically preferred by wet lab biologists.

Your one-stop shop for anything related to bioinformatics in R is Bioconductor. Please find all relevant annotation packages in their handy overview on their page and also see their workflows registry, which are usually very handy step-by-step guides that can be customized as needed.

• 0 views • link
written by Matthias Zepper Matthias Zepper

I think, this is the database right? Can we do from BioMart annotation package also in R and then in that we can also choose for the gene description and type by which we can identify the gene?? please correct me, if i am wrong

• 0 views • link
written by qiz218591 • qiz218591

0 answers

No answers yet.

Log in to answer this question.

More posts like this