This is a test version of Biostars. For the public version, visit https://www.biostars.org.
StringID to Ensembl ID

Hi,

How can I convert stringID to ensembl ID using python? The mapping identifier API convert gene symbols/ensembl ID to stringID but not vice-versa. Is there any other way?

Thanks

stringdbapi script ensemblid python stringid

1 answer

Not a python solution but you can do this with the R bioconductor package STRINGdb. Alternatively, you can download the protein aliases data from the download section of the STRING website and write a script to extract the info you need.

Log in to answer this question.