whole genome sequence assembly
can any one suggest me a good pipeline for assembling and annotating whole genome in eukaryotes.
• 1,040 views
•
link
written
by
manaswiniparija3 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Phylogenetic tree from whole genome using BUSCO
written by manaswiniparija3 •
-
Whole genome assembly
written by manaswiniparija3 •
-
Fish_genome_assembly
written by manaswiniparija3 •
-
whole genome sequencing and assembly
written by manaswiniparija3 •
-
transposable elements annotation
written by manaswiniparija3 •
-
detection of DNA transpsosons
written by manaswiniparija3 •
-
Forum: How to acknowledge in the paper a reference genome that hasn't been published yet?
written by ciemanek
-
identification of genes from contigs using reference genome
written by sharma_tina189059 •
-
Selective assembly of Genome
written by kshitijtayal •
-
how the pipeline for analysing whole genome of bacteria looks like?
written by Mo
What is your source data? Do you have short and long reads as well as Hi-C?
This repo might serve as a starter, but a good deal of manual curation during scaffolding is typically required for a good genome assembly.
Thank You Sir for your response.