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Cleaning File system in bioinformatics

Hi all,

Is there any software/workflow which can automatically clean/tidy up the file system for bioinformatics projects? For example, remove/tag duplicated datasets, find the same bam/sam files, make appropriate symlinks between them, compress uncompressed files, report potentially saved space, etc. Basically a C-Cleaner for bioinformatics.

cheers

filesystem

thanks! it seems to be a generic system for HPCs, but I was wondering if something bioinformatics related exists

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