I have the plink bed or pgen file but want to get a file of the dosage of all SNPs for all individuals. Can PLINK do this or does anyone know how to do that?
I have individuals with plink-formatted genotypes, and a phenotype file containing many binary phenotypes. I want to know how many people have the phenotype and …
Hi All, I have the file "1000GP_Phase3_combined.legend". I want to create a binary (*.bed, *.bim, *.fam file) PLINK file. Does anyone have experience? Thank you …
Hi all, I have a large genotype dataset and using this I created haplotypes and haploblocks in plink (http://pngu.mgh.harvard.edu/~purcell/plink/haplo.shtml). Now I want to assign these …