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Clustered, annotated dotplot to scRNA-Seq data

Hi! I would love some help with this one:

I wish to visualize a complex dotplot with text annotation bar and distinct color per cluster.

I am familiar with ComplexHeatmap and pHeatmap which are not useful in this case.

Attached is an reference figure enter image description here

Thanks!

scrna-seq dotplot visualization
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updated by Friederike Friederike • written by tomer9w • tomer9w

2 answers

Have a look at Clustered_DotPlot from scCustomize.

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written by fracarb8 fracarb8

The dittoSeq package also offers a dotPlot function that can be customized quite a bit and will work for both Seurat and SCE objects (other than scCustomize, which seems to support only Seurat AFAIK)

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written by Friederike Friederike

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