More posts like this
-
Seurat merge and batch correction
written by sooni •Hello. I want to merge 7 Seurat objects and do batch correction. How can I do this? I'm going to use the merge() function to …
-
How to convert trinotate results into GFF3
written by arshad1292 •Hello, I ran trinotate and obtained "trinotate_annotation_report.xls" file that I want to convert to GFF3 format. Can anyone please let me know how can I …
-
How to merge multiple paired fastq files using BBmerge?
written by Princy •Hello, I need to run Spades, i have WGS 230 paired end fastq files. First, I want to merge my R1.fastq and R2.fastq files into …
-
Question of cuffmerge
written by dhpark •Hello, I have a quick question. I am trying to merge my cufflinks. I have 2 different groups and 3 replicates each, totally 6 cufflinks. …
-
How to merge BLAST XML output from different database?
written by tcf.hcdgHello I did the command line BLAST against NCBI nr database. Because of the limited computational resourses, administrator at our university reccomended me to split …
-
genbank file parsing
written by sharmatina189059 •I have 73 genbank files and I need to extract all peptides along with locus tag as they contain multiple ORfs. I am new to …
-
Unmapped reads from STAR
written by spaul8505 •Hello, I am interested to look at the output of the unmapped reads which I obtained after STAR alignment Unmapped.out.mate1 Unmapped.out.mate2 and use this to …
-
Perl Code for Sequence Extraction
written by csmpresent •Hi, Please let me know how the coding can be done for extracting each sequence in separate files, from a single file (*.txt or *.fa) …
-
Blast
written by pjyoti29 •<p>hello everyone.</p> <p>can anyone tell me how can i do multiple sequence blast with tigr transcript assembly database...... i need to analyse the blast result …
-
Running Blast On Multiple Sequences At Tigr
written by pjyoti29 •<p>hello everyone,</p> <p>Can anyone tell me how to do multiple seq blast in TIGR...</p> <p>thanks,</p> <p>Jyoti</p>