filtering out 0/0 calls from VCF file

I have. VCF files in which some lines have 0/0 flag (0/0:466,0:466:99:0,1393,16935). Is there any standard way to remove 0/0 calls in the vcf file?

vcf

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updated 4.5 years ago by Pierre Lindenbaum 17K • | written 4.5 years ago by Sara 28

1 answer

bcftools view --min-ac 1

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written 4.5 years ago by Pierre Lindenbaum 17K

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