Help regarding vina split
Hi, I am using structure data of (approved only) drugs which is available in sdf format. I have converted this single sdf file into pdbqt using Open Babel and then split the pdbqt file using the vina split command. I would like to know why multiple pdbqt files have been generated from some of the molecules in the sdf file. I would really appreciate some help.
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Doubt on protein preparation before Vina
written by Ria •
-
Converting AutoDock-Vina PDBQTs to PDB files
written by Ricard •
-
Trouble with Ligand-Protein Docking in AutoDock Vina: Shows an error when docked against a new set…
written by bandaru •
-
How to combine docked ligand (in pdbqt format) and protein (in pdbqt format) into single pdb file? …
written by Joshua •
-
Problems separating and converting molecule files with openbabel
written by smithk •
-
format conversion using OpenBabel
written by roybatty269 •
-
Tools for generation 3D molecule structure from 2D
written by Katya •
-
Problems with sdf to pdb file conversion
written by mlovelace713 •
-
Molecular docking, Autodock vina
written by krishavc92 •
-
Computational Time for obspectrophore in Open Babel?
written by dxu108 •
