RNA-Seq HTseq galaxy DE analysis

Hi friends I have htseq data from TCGA. it contains patients name in first row and genes in first column : 200 columns and 20000 rows.

I dont want deseq2 in R. this needs to be done in galaxy.

my question is how to input htseq data into deseq2 galaxy? also how to input and add to my gene expression my clinical file for the two groups I want to compare?

Please help with with this. thanks

deseq2 galaxy rna-seq

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written 4.5 years ago by Rob •

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