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KEGG enrichment dotplot

Hello friends. I'm trying to visualize a dotplot using enrichplot package in R for KEGG and GO object created by enrichKEGG and enrichGO function of clusterprofiler package, but I get this error every time :

wrong orderBy parameter; set to default `orderBy = "x"` Error in ans[ypos] <- rep(yes, length.out = len)[ypos] : replacement has length zero

I don't know why. i tried everything but nothing happened. Does anyone know the answer? does anyone know what I have to do ?

enrichment dotplot kegg clusterprofiler go
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updated by Ram Ram • written by mahsa • mahsa

I get the same error. Did you manage to solve this?

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written by grant.hovhannisyan grant.hovhannisyan

1 answer

It seems you are not the only one who is getting this error, based on this GitHub issue. a workaround is to install the latest version of the package from the GitHub repo:

## install.packages("devtools")
devtools::install_github("YuLab-SMU/enrichplot")
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written by Hamid Ghaedi Hamid Ghaedi

tnx for your help. I did that function, but it didn't work. I get that error yet. This error :

Error in ans[ypos] <- rep(yes, length.out = len)[ypos] : replacement has length zero

I really don't know what the problem is.

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written by mahsa • mahsa

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