aligning 2 fasta file genomes
Hi all,
Is there a way to align 2 fasta file genomes? Since bwa and bowtie2 cant read large genomes with more than one sequence. The fasta files are about 2GB in size.
Taimur
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Ram
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taimur.al-said •
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taimur.al-said •
1 answer
There are tools specifically designed to align genomes, mummer for example.
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guillaume.rbt
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You can also check programs like
mauve(LINK) andlastz(LINK).