Single-cell gene expression & chromatin accessibility integration?
If my scRNA-seq & scATAC-seq are carried out on different cells (they're from same tissues), what's a better method to integrate these two data?
scatac-seq
single-cell
integration
scrna-seq
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Bastien Hervé
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tenderness.sunshine
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Hi,
I highly recommend that you read the recent paper benchmarking integration methods for scRNA-seq and scATAC-seq: Benchmarking atlas-level data integration in single-cell genomics
António
As I understand you need diagonal integration, have a look on this paper