how to know exons included in the my bed

i have a target bed i want to known the gene's exon_num ah, such as: chr1 11167491 11167611

chr1 11168231 11168351 ........

i want to get :

chr1 11167491 11167611 MTOR exon1,exon2,exon3

chr1 11168231 11168351 MTOR exonN,exonM

Thank you for all your help

bed

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updated 4.6 years ago by mad_nerd •

• written 4.6 years ago by tan •

1 answer

You basically want to use a bed annotation tool for this. see: Annotate .bed file with gene names and exon

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written 4.6 years ago by mad_nerd •

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