Thank you for your suggestion. I am an algorithm developer, and a newbie to single cell fastq processing. Could you kindly paste a link as an example (which is publicly available to download)? How did you find it? It is hard.
Is there a database or a large datasets, which have single cell bam files?
Could you kindly suggest a few datasets which have bam files which aligned to human genome? Thank you!
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Many 10x datasets have original cellranger aligned BAM files that you can find under Data Access tab in the SRA record.
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Here is one example: https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=ERR5206700 . Series of samples in same project.
You will need to use a cloud account to download.
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