multiBamSummary for unpaired end read?
Hello everyone,
I am using multiBamSummary to computes read coverages for many bam files.
multiBamSummary bins --bamfiles *.bam -out readCounts.npz --outRawCounts readCounts.tab
However, I got errors as below. May I get help please??
[E::bgzf_read] Read block operation failed with error 2 after 0 of 4 bytes
Traceback (most recent call last):
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1 answer
One of your BAM files is corrupt.
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Devon Ryan
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Looks like you changed the error message that was posted previously. I think the answer given by @Devon still applies.