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Artemis tool usage

Hi,

Can somebody please tell me how to obtain the .tab annotated file for a genome?

I'm learning how to use Artemis software. So I've to input a .dna (fasta file) and a .tab( which I believe is the annotated file of that genome). I've taken the S.typhi genome as .dna file. But I don't know how to get the .tab file.

Many thanks in advance.

artemis
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updated by Ram Ram • written by anjalivasudevan98 • anjalivasudevan98

1 answer

You should be able to read in a GFF file of annotations over a FASTA file, otherwise you can just load a GBK or GFF (Full) if memory serves.

Pretty sure a .tab file is just a tsv of genomic features which is basically what a GFF is.

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written by Joe Joe

Thank you, I just tried using the .gbk file and it seems its working. Thanks for the response!

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written by anjalivasudevan98 • anjalivasudevan98

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