Annotate genes with coordinates
Hi everybody,
I would like to have an advice on gene annotation. I have a list of gene names, and from this list I have to recover the gene coordinates. Can someone suggest me some tools or some library to do that ?
Thank you
• 1,173 views
•
link
updated
by
zx8754
•
written
by
martin.gallix •
•
written
by
martin.gallix •
1 answer
BioMart. Help video to get you started. Filter by your list of gene names, get the coordinates as attributes.
Log in to answer this question.
More posts like this
-
Extracting genomic coordinates for a Variant calling pipeline
written by salman_96 •
-
Count profiles in R
written by martin.gallix •
-
Binary heatmap using R
written by martin.gallix •
-
Burden Test: rvatk (Rare Variant Analysis Toolkit)
written by martin.gallix •
-
Missense Variant on hg19
written by martin.gallix •
-
How to annotate peaks inside TADs and annotated with Gene expression?
written by carlosalfonsogonzalez6 •
-
where to find a list of often mutated or lost regions in cancers
written by Lila M
-
Estimating the distribution of small non-coding RNAs among the reads: Which annotation database / r…
written by f.fassihian •
-
Can we draw phylogenetic tree using a set of Kegg Orthology Terms ?
written by Amk
-
How To Convert List Of Entrez Ids Into Gene Name
written by grosy •
