I have constructed a gene tree for a single gene family across various species. The internal nodes of this tree represent gene duplication events and …

Hello biostars, I have a fungal genome assembly file, which has 987 sequence. I want to construct phylogenetic tree with related species.(10 numbers). Could anyone …

From my point of view, if there is differences between gene tree and species tree topologies, such as we test the RF betweent the two …

Hello! I have approximately bacterial 40 (non conserved) genes in which I am interested, I want to build a phylogenetic tree per gene (so 40 …

I was asked to construct a phylogenetic tree to show if some isolates of a bacterial infection are closely related. There seems to be two …

How can I identify horizontal gene transfer in bacterial strains? What are the possible tools? Can bacteria directly transfer their genetic material to the host? …

Hello all, I am looking to test an alignment-free phylogenetic tree building algorithm I wrote. It can perform both gene and species trees. I have …

<p>Hello,</p> <p>I am a molecular biology PhD student who needs to do some basic bioinformatics work for my project. In my project, I was building …

Hi all, I would like to plot potential interactions of proteins from two bacterial species (we study horizontal gene transfer) String-db only maps proteins from …

<p>I have a plenty of gene trees and a species tree. I was wondering if there is any tool to detect phylogenetic conflict between gene …