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Genomic landscape of Neisseria gonorrhoeae wild-type strain whole genome schematic.

Hi, I am new to Neisseria gonorrhoeae research. Is there figure of Neisseria gonorrhoeae wild-type strain (I believe it is F19) complete genome, annotated, with nucleotide positions?

For Covid-19 whole genome, there are a lot of figures can be found that show different regions (ORF1ab, S, M, ...) and the start and end of each region. I am not able to find similar figures for Neisseria gonorrhoeae.

Thanks

figures neisseria_gonorrhoeae regions whole_genome strain
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updated by GenoMax GenoMax • written by eli_bayat • eli_bayat

You can probably make one yourself by downloading the genome annotation and using circos (LINK).

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written by GenoMax GenoMax

1 answer

GCView Server will help you to visualize .gbk file.

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written by MSRS MSRS

Its great! Thank you so much. how should I download genome annotation. I searched and I found this link to download genome annotation for Neisseria gonorrhoeae strain (Download genome annotation in GFF, GenBank or tabular format). Will you please confirm if I did correct?

Download genome annotation

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written by eli_bayat • eli_bayat

This is awesome, thank you so much!:)

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written by eli_bayat • eli_bayat

Download the gbff file format file for FA19 genome from here. Uncompress the file. Start a new map on GCView Server. Then upload gbff file to the server @MSRS linked above. You should get a plot that looks like this.

enter image description here

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written by GenoMax GenoMax

Awesome, Thank you sooo much. Its great!

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written by eli_bayat • eli_bayat

eli_bayat : Please accept (green check mark) @MSRS answer to provide closure for this thread.

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written by GenoMax GenoMax

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