Haplotype map Picard CrosscheckFingerprints · Biostar

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Haplotype map Picard CrosscheckFingerprints

Hi everyone,

I am trying to run Picard CrosscheckFingerprints on two bamfiles to compare if they derive from the same patient. (https://gatk.broadinstitute.org/hc/en-us/articles/360041417052-CrosscheckFingerprints-Picard-) I need a haplotype map (e.g. in vcf format) for this process. Where/how do I get this file?

Thank you!

Best

Lynn

crosscheckfingerprints haplotype vcf picard map

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written 4.9 years ago by loy_loy •

1 answer

Found it here :)

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written 4.9 years ago by loy_loy •

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