H & E images ANALYSIS protocol · Biostar

This is a test version of Biostars. For the public version, visit https://www.biostars.org.

H & E images ANALYSIS protocol

Hi All,

I am looking to analyze HnE images (hematoxylin and eosin) analysis. Can you please let me know if there are any Tutorials or Protocols available so that I can understand and learn to conduct the analysis? I am bit confused about where to start, I have few images but I am clueless about where to start.

Regards, Dav

analysis image hne

• 722 views • link

written 4.9 years ago by David_emir

0 answers

No answers yet.

Log in to answer this question.

More posts like this

copy number variation
written 5.5 years ago by Rob •

Hello friends, I want to do copy number variation analysis for TCGA patients and I have no idea about it. I need to learn the …
Validating Results from NMF Clustering & Consensus clustering
written 7.1 years ago by David_emir

Hi, I am running NMF/Consensus Clustering on my cancer samples and wanted it to cluster the samples into various subgroups, my question is how to …
Downloading RNA-Seq Raw Count data form ICGC
written 7.6 years ago by David_emir

Hi All, I am looking for downloading Raw-counts for PAAD from RNA-seq data From ICGC portal. Is there a way where we can download data …
QC on SNPs located in a haploid genome - GenomeStudio
written 8.2 years ago by David_emir

Hello All, I have Illumina MEGAEx Genotyping. idat files and I need to conduct QCing for the same. I am interested in conduction **QC on …
Algorithms in cwl
written 8.4 years ago by vibhu2397 •

Hi, I am a newbie to CWL and i still am learning how does it work. However, i have a task where i want to …
Differentially methylated regions Analysis
written 8.4 years ago by David_emir

Hello All, I have TCGA data from RNAseq(Counts data) and DNA-Meth data. I am interested to conduct Differentially methylated regions Analysis on the same. I …
Custom Reference panel creation for data imputation from .vcf files
written 8.6 years ago by David_emir

Hello All, I need your help in **creating a reference panel (customized)** which can be used for imputation purpose. I have around 100 VCF files …
GitHub-GTEx Pipeline- how to execute ?
written 8.7 years ago by David_emir

Hello Guys, I am interested on getting Correlations between genotype and tissue-specific gene expression levels. I am trying to replicate the same analysis pattern which …
TCGA - COAD read data gene expression analysis
written 8.7 years ago by David_emir

Hi All, I am planning to conduct differential gene exression analysis on TCGA-COAD/READ samples. Currently the samples are ported to GDC portal and its difficult …
rna seq public databases
written 11.5 years ago by David_emir

Hi. Please let me know the various publicly available databases for RNA seq data. I am actually looking at various available databases where I can …