%% error in Rstudio
dc.markers %>% group_by(cluster) %>% top_n(2, wt = avg_logFC)
the above code is giving error even after using dplyr and matrix libraries in seurat analysis in rstudio
Error: Problem with `filter()` input `..1`.
i Input `..1` is `top_n_rank(2, avg_logFC)`.
x object 'avg_logFC' not found
i The error occurred in group 1: cluster = 0.
Run `rlang::last_error()` to see where the error occurred.
• 2,349 views
•
link
1 answer
Try with avg_log2FC, They changed the names of the columns in the newer version
• 0 views
•
link
Log in to answer this question.