Biotype assignment for co-expression network
Hello, I am trying to construct a co-expression network for non-coding RNA as well as mRNA in a single network. I have done differential analysis and I have constructed correlation matrix. However, my file has following columns after constructing network- gene1 gene2 cor p.adj
Now, I tried assigning biotypes with the help of biomaRt, but since all since it's an interaction data- biomaRt could not assign biotypes in repetition.
My queries are- (1) How should I assign biotype to my interaction data? OR (2) How should I construct co-expression network based on biotypes?
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imaparna27 •
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