I tried to compare results which I got it from DESeq2, but got this error?

Error in cleanContrast(object, contrast, expanded = isExpanded, listValues = listValues, : as CF is the reference level, was expecting condition_S1_vs_CF to be present in 'resultsNames(object)'

deseq2

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written 5.3 years ago by arulin •

At the minimum, we will need to see your coldata, the output of resultsNames(dds) and the results(...) call you made to help you with this issue.

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written 5.3 years ago by Carlo Yague

see [[ Please read before posting a question ::: How To Ask A Good Question ]]

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written 5.3 years ago by Carlo Yague

Thanks for the reply, fortunately I was able to find the issue in my script. Thanks agin.

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written 5.3 years ago by arulin •

0 answers

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