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i have proteomics data in .raw format

I have proteomics data in .raw format , how can I use it for proteomics analysis

protein
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updated by tothepoint tothepoint • written by rishav513 • rishav513

what is the output of file input.raw or head input.raw

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written by Pierre Lindenbaum Pierre Lindenbaum

The file is "hb.raw" and it is not accessible

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written by rishav513 • rishav513

2 answers

Depends on what you want to know. Have a look at this tutorial, which I found by just searching for "proteomics raw format". There is also a Bioconductor package for mass spec and proteomics analyses.

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written by Malte Petersen • Malte Petersen

You need to convert your raw files in to .mgf format to proceed further. raw read directly seems tricky to understand.

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written by tothepoint tothepoint

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