More posts like this
-
I need a tool that allows me to see a whole genome and point out previously annotated genes
written by Enrico 0Hi guys. I would like to know if someone knows a tool that can explicitly show the location of a set of genes I have …
-
Tool: Binding free energy
written by gustmarq4 0Hi, I'm working with MD simulation and I need to calculate the Binding free energy of the complex. I want to use SIETRAJ/SIE method in …
-
trim scripts help
written by dew 1Hi, May I know if anyone has used the trim tool ([http://graphics.med.yale.edu/trim/][1]), I am trying to use this tool, while the `paired_end_trim.pl` file in the …
-
cram.cip format ???
written by 2nelly 35Hi all! Does someone know how to manipulate cram.cip files. I ve never seen before this type of extension (.cip). I tried to convert them …
-
Consolidated MAF file for all cancers in TCGA
written by somy.ork 0Hi I want a consolidated MAF file for all cancers from TCGA data. Is it correct to use the MAF search tool: https://tcga-data.nci.nih.gov/search/#/ Click all …
-
How to check whether two genomic regions contact in 3D?
written by trulala 2<p>Hello,</p> <p>I want to check for a group of human genes in a specific cell type, whether they contact each other in 3D (based on …
-
cis-eQTL Results Visualization
written by fusion.slope 26Hi Guys, does some one know how to visualize cis-eQTL results? I have found Reveal, ggbio, Locus Zoom, and eQTL VIEWER,but if someone of you …
-
Analyzing Illumina Infinium Omni5M Genotyping Data
written by Abhi 163<p>Hey Guys</p> <p>I have recently obtained some relatively older genotyping dataset based on Illumina's Infinium Omni 5m platform for about 200 samples. In summary I …
-
How To Use Artemis To Predict The Certain Potential Type Of Protein?
written by User 5570 1<p>hello everyone!</p> <p>i got a question to ask you guys.recently our lab focused on a type of secreted protein to predict and its identification,then i …
-
Precalculated Ld Blocks
written by Radhouane Aniba 79<p>Hi everyone,</p> <p>I have a list of SNPs and would like to search for proxy SNPs in LD blocks under some thresold of r2 and …
I think you may need to adjust your question to get a reasonable answer. Are you having problems running the tool? Do you want alternatives? Do you want to understand what editing is?
Not a real question, closing. Will reopen if you add a comment defining a real question.