Question

Multiple Alignment Software

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10.2 years ago

areejrushdi1982 ▴ 10

can you recommend a free online multiple alignment software for aligning large number of sequences

multiple-alignment • 4.0k views

ADD COMMENT • link updated 8.0 years ago by Suzanne ▴ 100 • written 10.2 years ago by areejrushdi1982 ▴ 10

score 2 · Answer 1 · 2014-02-16

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10.2 years ago

Devon Ryan 104k

EBI has a list with a fair number of options.

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score 1 · Answer 2 · 2014-02-16

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10.2 years ago

mikhail.shugay 3.5k

Hello! Try out Clustal-Omega (https://www.ebi.ac.uk/Tools/msa/clustalo/) and also its standalone version (http://www.clustal.org/omega/).

ADD COMMENT • link 10.2 years ago by mikhail.shugay 3.5k

score 1 · Answer 3 · 2016-05-04

Jalview is a free open source, multiple sequence alignment visualisation software for editing, annotating and analysing proteins, RNA and DNA data. It runs on PCs and MACs and can be downloaded from www.jalview.org.uk. Check out the Jalview Online Training YouTube channel which has library of videos to help people get started.

score 0 · Answer 4 · 2014-02-16

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10.2 years ago

pasquini.miriam • 0

Hi!! Try with ESPript 3.0! http://espript.ibcp.fr/ESPript/ESPript/

ADD COMMENT • link 10.2 years ago by pasquini.miriam • 0