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Simulating Cnv Into Genome Reference

Hi everybody, I´d like to know if someone has some hint to simulate introducing CNVs into genome reference in way as near to actual as possible. Thanks in advance.

cnv
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updated by Leandro Lima Leandro Lima • written by chico.nascimento • chico.nascimento

Hi Chico.

I'm trying SCNVSim. Did you find any other tools?

Thanks

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written by Leandro Lima Leandro Lima

2 answers

I recommend PEMer (Gerstein lab).
PEMer has SV-simulation tool which lets you to specify CNV information you want (CNV type, size, how many).

• 118 views • link
written by PoGibas PoGibas

I'm using RSVSim, now. For me, it was the best and easiest to use, so far.

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written by Leandro Lima Leandro Lima

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