<p>Hello,</p> <p>Is there a program/way that will keep track of the positions of column before and after profile alignments?</p> <p>For example, muscle does profile alignment …

<p>Hello,</p> <p>I was wondering if there is a way in Biopython to remove columns from multiple sequence alignment that have gaps.</p> <p>There is a whole …

<p>The genomes in the NCBI ftp site (<a href='ftp://ftp.ncbi.nih.gov/genomes/Bacteria/'>ftp://ftp.ncbi.nih.gov/genomes/Bacteria/</a>) is listed in alphabetic order with bioproject id at the end. And, there is no taxonomic …

<p>Hi everyone, I am fairly new in genome assembly. I have some 454 reads as well as illumina reads for the same baacterial strain. When …

<p>Hi all, I am trying to enter into the metagenomics analysis. I already collecting some samples for gut metagenomics sequencing using illumina technology (and also …

<p>Hi, I would like to find the sequence of a repeat gene in my WGS reads. I have raw reads from both 454 and Illumina, …

<p>Hi,</p> <p>We have received 454 targeted sequencing data (low depth) and would like to identify copy number segments from this. The rep at 454 said …

<p>hi, we have sequenced a viral genome, and assembled it with 454 newbler. How can I know whether the genome is circular or linear? Should …

<p>I want to sequence in 454 for microbal diversity. Is it better to sequence 16srRNA or I can sequence everything and then use a software …

<p>Hello everyone,</p> <p>Is there any software available to directly extract variant information from a 454 ace file (produced by Newbler assembler) ? I ask this …