This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Snp Calling And Annotation

I am working on mouse exome sequencing data, my question is that is there tools which work for mouse exome analyze like snp calling and annotation?

annotation

Yes, there are.
PS.: You tagged your question under "annotation" - all you have to do is to check previous questions with this tag.

1 answer

you only have to select an annotation tool that allows you to customize the selection of the annotation databases. if, for instance, your annotation data can be queried through the UCSC browser, ANNOVAR would do as it allows you to use any of those tables.

Log in to answer this question.