Forum: A Gist To Get The Genbank Ids For All The Nucleotide Entries Linked To A Taxon Id
Hi all,
Here is my gist to get the genbank ids for all the nucleotide entries linked to a taxon id. The number of requests is minimized using the retmax and retstart parameters provided by the Entrez Utilities.
Best,
Fabrice
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Ram
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written
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Fabrice Jossinet
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written
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Fabrice Jossinet
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Nice to see, after our Twitter conversation.
Nice and self contained - I wonder how short it would be using Biopython's
Bio.Entrezrather than using urllib and ElementTree directly?as @Peter said why did not you use BioPython is there is an important reason for that