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Tool: Script: Getting information about SRX experiment ID from NCBI database

The following is the link to the script: Gist github link

Create a file named "list_of_all_srx.txt" in the same directory as the script file and this file should have a list of single SRX ID as entries in every line.

Script also generates an output file named "list_of_all_srx_with_info_on_seq_types_SRRs_title.txt" which has information on the list of SRRs, number of reads in .fastq file and sequencing type

Note: This script was tested in both Mac OS and linux OS and it requires "re" and "requests" libraries in python.

next-gen rna-seq

Please add usage information at top of your script.

jayeshkumarsundaram I suggest that instead of multiple posts with sparse content you make one single post, add your scripts, with usage information.

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