Macs - Wiggle To Normalized Wiggle
Is it possible to create a normalized wiggle file from MACS raw wiggle file ?
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Repineme •
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Hi usually MACS produce RAW wiggle file by counting reads in certain window. That's fine. Wiggle files from MACS should be also normalized by the sequencing depth in million reads. But I'm wondering how to do this in a simple way.
Any suggestions will be appreciated! Thanx
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Pierre Lindenbaum
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Repineme •
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what's the difference between a 'normalized' and a 'raw' wiggle file ?
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Hi usually MACS produce RAW wiggle file by counting reads in certain window. That's fine. Wiggle files from MACS should be also normalized by the sequencing depth in million reads. But I'm wondering how to do this in a simple way.
Any suggestions will be appreciated! Thanx
Hello Repineme!
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