Protein Prediction
I have predicted a whole membrane protein by robetta server and docked using glide with natural compounds I isolated from a plant. for the same protein I have predicted the pottasium binding regions using glide-prime can I dock this particluar model with natural compounds and will it be a valid work? Parallely I have predicted a related protein by modeller and docked with same natural compounds using same glide dock program. please suggest if this is a valid work... experimental determination is a failure for this membrane protein as per literature studies.
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