I'm doing an miRNA array and have a list of ~450 differentially expressed miRNAs. I am attempting to be able to post the entire list into a search box and have them classified for me based on family/cluster and potential role.
Basically I'm trying to find a site similar to http://202.38.126.151/hmdd/tools/tam.html but one that actually contains the entire H. sapiens miRNA database instead of just a fraction. That website does me no good if I can't classify 4/5 of the miRNAs just because they're not included.
I'd prefer to do not do this by hand but if I have to I will. If there isn't a searchable database could anyone point me to a database with the families classified and I'll just search by hand.
Thanks.
2 answers
miRBase does have the families that I can sort manually, that's what I'm doing since I can't find anything else.
It's sad really because TAM does the disease or protein classification as well.
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