Looking For A Webservice To Annotate Genomic Intervals
I'm looking for a Webservice for annotating intervals on genomic positions. I have a set of biologists that use a service like Jaspar to annotate TF binding positions. Then they spend about 12 hours using MS Word to annotate the promoter sequences with the results. I have some programming tools to do it myself but they don't want to learn to to program. Does anyone know of any Web services that would be simple for them to use?
I'm looking for something that can go from a table of intervals to something like this: http://www.hiv.lanl.gov/content/immunology/old_maps/ab/p17.html
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what is the genome you are working with?
Its human but it doesn't matter. They are only looking at ~1-5KB of sequence.