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Music Error

Hi,

I am trying to run bmr calc-covg in Genome MuSiC and keep receiving the following error:

Can't call method "print" on an undefined value at /usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcCovg.pm line 256

Does anyone know how I can resolve this issue?

Thanks a lot,

Will

music
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updated by Chris Miller Chris Miller • written by will.lockwood • will.lockwood

1 answer

If I'm skimming the code right, that appears to be where it's trying to write to a file in your output directory. Does the output directory exist? (the one you specified in the parameters?)

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written by Chris Miller Chris Miller

Thanks for the help Chris. It appears that the directory did exist but it was a permissions issue with Virtual Box.

It seems to work now.

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written by will.lockwood • will.lockwood

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