Is there any place to download 1000 genome SNPs and Indels data in a single merged file for each pilot (pilot 1 , 2 , and 3) ? I am trying to use GATK and thought to use 1KG indels and SNPs vcf files to realign/recalibrate my calls.
I appreciate your input.
Thank you all ... appreciate your input
mpiro, it's nice that you wish to thank people for their input, but please do it as a comment to the question, or their answer - don't generate an additional 'answer'. If you feel one of these replies really helped you make it the 'Accepted answer'