This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Getting 0 bytes or 1 line from galaxy

Hi,

I have an existing dataset from nanopore run in fast5 format. I'm using GALAXY to convert it into fastq format. The tools which I've trialled from the tools list are : 1) extract fastq in tabular format from a set of fast5 files and 2) extract read in fasta or fastq format from nanopore files.

I got either 1 line or 0 bytes from these runs,,,no output.

Does anyone has any idea why? or which step did i miss or input the wrong thing?

Thank you.

sequence

galaxy outputs the logs, for each job. Look at the logs.

0 answers

No answers yet.

Log in to answer this question.